I use use protein network analysis for genomics, namely I developed the GeneWanderer for identifying disease-relevant genes using a random-walk approach. I am also working with a lot machine learning methods such as SVMs, Deep Neural Networks, Ensemble methods and more.
During my PhD I helped developing the Human Phenotype Ontology. I have published several tools and methods to harness the content of HPO for several purposes in the genomics field. This lead me to the semantic web world.
I program in Java, R, Perl, Phython, JS, Matlab, bash, etc.